| MirGeneDB ID | Dmo-Novel-7-P4 |
|---|
| Family name |
DMO-NOVEL-7 (all species) |
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| Seed |
GCACACC |
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| Species |
Fruit fly (Drosophila mojavensis) |
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| MiRBase ID |
|
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| Paralogues |
Dmo-Novel-7-P1
Dmo-Novel-7-P2
Dmo-Novel-7-P3
|
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| Orthologues |
|
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| Node of Origin (locus) |
D. mojavensis
|
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| Node of Origin (family) |
D. mojavensis
|
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Genome context
(Dmoj_caf1) |
scaffold_6308: 1300283-1300343 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CUAGUAGGGAAUUCGUAGUCCUAUGGGUUUUGCACACCGGCGAUCUUAACGUAUUUUCUAAUAUAUAUCGUUAAAAUCGUCGACGUACACAAUUCUAGGGCUAAUUUAACAACAACGUUUA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CUAGUAGGGAAUUCGUA---| U U C AC C UAUUUUCU
GUCCUA GGGUU UG AC CGGCGAU UUAACG \
CGGGAU CUUAA AC UG GCUGCUA AAUUGC A
AUUUGCAACAACAAUUUAAU^ - C A CA A UAUAUAUA
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| Comment | There is a second Dicer cut -1 on both arms. |
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Dmo-Novel-7-P4_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UGCACACCGGCGAUCUUAACGU -22
Get sequence
|
|---|
| Star sequence |
Dmo-Novel-7-P4_3p* |
| mirBase accession | None |
|---|
| Sequence |
39- GUUAAAAUCGUCGACGUACACA -61
Get sequence
|
|---|
