| MirGeneDB ID | Dmo-Novel-3-v1 |
|---|
| Family name |
DMO-NOVEL-3 (all species) |
|---|
| Seed |
UGAGAUA |
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| Species |
Fruit fly (Drosophila mojavensis) |
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| MiRBase ID |
|
|---|
| Paralogues |
Dmo-Novel-3-v2
|
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| Orthologues |
|
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| Node of Origin (locus) |
D. mojavensis
|
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| Node of Origin (family) |
D. mojavensis
|
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Genome context
(Dmoj_caf1) |
scaffold_6308: 1300635-1300699 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AUAUUUAUAUAUCUAAUUGGUGUCUUUUGAGCUUUGCCCAGAAGAUCUCACUAAUUUGUUUUAGAUUUCGUUAUUGAGAUAUUCUGAGCAAGCAUAAAAGGCUGCCACCAGCAACAGCUGAUACA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AUAUUUAUAUAUCUAAU- -| A U C G CUAAUUUGUUU
UGGU GUCUUUUG GCUU GC CAGAA AUCUCA U
ACCG CGGAAAAU CGAA CG GUCUU UAGAGU A
ACAUAGUCGACAACGACC U^ A - A A UAUUGCUUUAG
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
|---|
| Star sequence |
Dmo-Novel-3-v1_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- GCUUUGCCCAGAAGAUCUCACUA -23
Get sequence
|
|---|
| Mature sequence |
Dmo-Novel-3-v1_3p |
| mirBase accession | None |
|---|
| Sequence |
43- UUGAGAUAUUCUGAGCAAGCAU -65
Get sequence
|
|---|
