| MirGeneDB ID | Dmo-Novel-10 |
|---|
| Family name |
DMO-NOVEL-10 (all species) |
|---|
| Seed |
UUCGAGG |
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| Species |
Fruit fly (Drosophila mojavensis) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
|
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| Node of Origin (locus) |
D. mojavensis
|
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| Node of Origin (family) |
D. mojavensis
|
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Genome context
(Dmoj_caf1) |
scaffold_6308: 1307931-1307995 [+]
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
CAUAGUAAAAAUCGAAGUUAAAACAUUUGCUUUCGAGGUAUUAUGUAGUGCUAUACGUUUAUGUUUCGGUUAUCACUACGUUUUAGCUCGUUAACGAAAUGCUCUACUGUGCAACAAGAAAAUGU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CAUAGUAAAAAUCGAAGUUAAAA- GCUUU-| G UU C UACGUUUA
CAUUU CGAG UA AUGUAGUG UA \
GUAAA GCUC AU UGCAUCAC AU U
UGUAAAAGAACAACGUGUCAUCUC GCAAUU^ G UU U UGGCUUUG
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Dmo-Novel-10_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UUUCGAGGUAUUAUGUAGUGCUA -23
Get sequence
|
|---|
| Star sequence |
Dmo-Novel-10_3p* |
| mirBase accession | None |
|---|
| Sequence |
42- UCACUACGUUUUAGCUCGUUAAC -65
Get sequence
|
|---|
