| MirGeneDB ID | Dmo-Mir-975 |
|---|
| Family name |
MIR-975 (all species) |
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| Seed |
CAAGAUG |
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| Species |
Fruit fly (Drosophila mojavensis) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Dan-Mir-975
Dme-Mir-975
Dsi-Mir-975
Dya-Mir-975
|
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| Node of Origin (locus) |
Drosophila
|
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| Node of Origin (family) |
Drosophila
|
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Genome context
(Dmoj_caf1) |
scaffold_6328: 2901150-2901214 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AAUGCCAGCAUUUCAUAUGGUCUUUGAUUGUAGAUACUCCCUAUAUCCCGUAUGUGCGAUACUUUGAUAAAAUACAAGAUGUAUGGGGUGUCUGCAAUCACAAACCACAUAGCCGCAAUCAAACA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AAUGCCAGCAUUUCAUA-| CUU C CC GUGCGAUA
UGGU UGAUUGUAGAUACUCC UAUAUC GUAU C
ACCA ACUAACGUCUGUGGGG AUGUAG CAUA U
ACAAACUAACGCCGAUAC^ AAC U AA AAAUAGUU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17), UGUG in loop |
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Tissue expression
|
|
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| Star sequence |
Dmo-Mir-975_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- UAGAUACUCCCUAUAUCCCGUAU -23
Get sequence
|
|---|
| Mature sequence |
Dmo-Mir-975_3p |
| mirBase accession | None |
|---|
| Sequence |
43- ACAAGAUGUAUGGGGUGUCUGC -65
Get sequence
|
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