| MirGeneDB ID | Dma-Novel-7 |
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| Family name |
DMA-NOVEL-7 (all species) |
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| Seed |
CCUGUUU |
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| Species |
Large common water flea (Daphnia magna) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
D. magna
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| Node of Origin (family) |
D. magna
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Genome context
(DMA_ASM399081) |
NC_046175.1: 6286077-6286139 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UUUGACCCCUUUUGGGAGGGGGUGUGUGUAGCCUGUUUAGGGUCGUCAAGCGGUCCCCGAUCUCUAUUCCACGGGCUUCCUUCGACAGAGCAACAUCAAAGAGACAUCGCUCCAAAGUUGACC
Get precursor sequence
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| Structure | 10 20 30 40 50 60
UUUGACCCCUUUUGGGAGGGGG---| U A - U UC AAGC UCCCCGA
UG GUGU GC CUGUU AGGG GUC GG \
AC UACA CG GACAG UUCC CGG CC U
CCAGUUGAAACCUCGCUACAGAGAA^ - A A C UU GCA- UUAUCUC
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Mature sequence |
Dma-Novel-7_5p |
| mirBase accession | None |
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| Sequence |
0- GCCUGUUUAGGGUCGUCAAGCGG -23
Get sequence
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| Co-mature sequence |
Dma-Novel-7_3p |
| mirBase accession | None |
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| Sequence |
40- ACGGGCUUCCUUCGACAGAGCAA -63
Get sequence
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