| MirGeneDB ID | Dma-Novel-6 |
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| Family name |
DMA-NOVEL-6 (all species) |
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| Seed |
GGGGGAA |
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| Species |
Large common water flea (Daphnia magna) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
Daphnia
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| Node of Origin (family) |
Daphnia
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Genome context
(DMA_ASM399081) |
NC_046175.1: 6286446-6286507 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UUUUUUUUCGUUUGUUCAAGACAGGCAUCAGGGGGGAACUUUACUCAGUUUGAUUCAUUUAAUUUGAAAGUCACUGGGUACGUUCGCCCUUGUUGAAUGAAUCUUAUAUUCCUUCAGUUCAU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
UUUUUUUUCGUUUGUUCAAGA--| GG U G UU UU CAUUUA
CA CA CAGGGG GAAC UACUCAGU GAUU \
GU GU GUUCCC CUUG AUGGGUCA CUGA A
UACUUGACUUCCUUAUAUUCUAA^ AA U G C- -- AAGUUU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Mature sequence |
Dma-Novel-6_5p |
| mirBase accession | None |
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| Sequence |
0- GGGGGGAACUUUACUCAGUUUGAUU -25
Get sequence
|
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| Co-mature sequence |
Dma-Novel-6_3p |
| mirBase accession | None |
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| Sequence |
40- UCACUGGGUACGUUCGCCCUUG -62
Get sequence
|
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