| MirGeneDB ID | Dan-Novel-8 |
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| Family name |
DAN-NOVEL-8 (all species) |
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| Seed |
AAGGCAU |
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| Species |
Fruit fly (Drosophila ananassae) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
D. ananassae
|
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| Node of Origin (family) |
D. ananassae
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Genome context
(Dana_caf1) |
scaffold_12903: 555085-555146 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GAGGAGAGUCGAUCUUAAAGAUUUUCGUAGCUCGUCUAUGUGGUGCCUGUAAGUCCUGUUUUAAAAGUCUUAAGGCAUUUCUUAGAUGAUCUUUGAUGGUCUUAAUAGCUUCAUGAUAAUAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GAGGAGAGUCGAUCUUA--| UU U C UGU G UCCUGUU
AAGAU UCG AG UCGUCUA GGUGCCU UAAG \
UUCUG AGU UC AGUAGAU UUACGGA AUUC U
AAUAAUAGUACUUCGAUAA^ GU U U UCU - UGAAAAU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
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| Star sequence |
Dan-Novel-8_5p* |
| mirBase accession | None |
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| Sequence |
0- CUCGUCUAUGUGGUGCCUGUAAG -23
Get sequence
|
|---|
| Mature sequence |
Dan-Novel-8_3p |
| mirBase accession | None |
|---|
| Sequence |
40- UAAGGCAUUUCUUAGAUGAUCU -62
Get sequence
|
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