| MirGeneDB ID | Dan-Novel-6 |
|---|
| Family name |
DAN-NOVEL-6 (all species) |
|---|
| Seed |
AGAGGUA |
|---|
| Species |
Fruit fly (Drosophila ananassae) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
D. ananassae
|
|---|
| Node of Origin (family) |
D. ananassae
|
|---|
Genome context
(Dana_caf1) |
scaffold_12903: 550718-550780 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
CUUAUGAAUAUCUUAUAUAAUAUCACUUUUGAGAGGUACGGAAUGCUUGUAUGUGACCUUGAACUUCAUGGAAGCAUUUGGCGUACAUCUAAAAAGUUAUAUUUAUUUCCCAAUAUCCCUCAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CUUAUGAAUAUCUUAUAU-- C G G --| G UGACCU
AAUAU ACUUUU AGA GUACG GAAUGCUU UAUG \
UUAUA UGAAAA UCU CAUGC UUUACGAA GUAC U
GACUCCCUAUAACCCUUUAU U A A GG^ G UUCAAG
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Dan-Novel-6_5p |
| mirBase accession | None |
|---|
| Sequence |
0- GAGAGGUACGGAAUGCUUGUAUG -23
Get sequence
|
|---|
| Star sequence |
Dan-Novel-6_3p* |
| mirBase accession | None |
|---|
| Sequence |
38- UGGAAGCAUUUGGCGUACAUCUAAA -63
Get sequence
|
|---|
