| MirGeneDB ID | Dan-Novel-5 |
|---|
| Family name |
DAN-NOVEL-5 (all species) |
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| Seed |
GUAGAAG |
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| Species |
Fruit fly (Drosophila ananassae) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
D. ananassae
|
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| Node of Origin (family) |
D. ananassae
|
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Genome context
(Dana_caf1) |
scaffold_12903: 550549-550607 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UAAUAAUUCUUGGAGUAUUAUCUAAUUAUCAGUAGAAGCCAAAAGGAUGUGAGUAUUUUUGAAAUCCACCUCCCUUUGGCUUCUACUACUUAAUUGGUAAUCAAAACUGCUUCAAAAAC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UAAUAAUUCUUGGAGUA--| U UC- A U AGUAUUU
UUA CUAAUUA AGUAGAAGCCAAA GGA GUG \
AAU GGUUAAU UCAUCUUCGGUUU CCU CAC U
CAAAAACUUCGUCAAAACU^ - UCA C C CUAAAGU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Dan-Novel-5_5p |
| mirBase accession | None |
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| Sequence |
0- AGUAGAAGCCAAAAGGAUGUG -21
Get sequence
|
|---|
| Star sequence |
Dan-Novel-5_3p* |
| mirBase accession | None |
|---|
| Sequence |
38- CCUCCCUUUGGCUUCUACUAC -59
Get sequence
|
|---|
