| MirGeneDB ID | Dan-Mir-973 |
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| Family name |
MIR-973 (all species) |
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| Seed |
CUGUUCA |
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| Species |
Fruit fly (Drosophila ananassae) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Dme-Mir-973
Dmo-Mir-973
Dsi-Mir-973
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| Node of Origin (locus) |
Drosophila
|
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| Node of Origin (family) |
Drosophila
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Genome context
(Dana_caf1) |
scaffold_13417: 2478669-2478737 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GAACUUAAUAUUGAAAUGACACCGACUCCUCGUGUUUGGCGAUUGAACCUGGAUUUUUAAUUUUCGAGUACGAGAAAUCUGUUCAUUCCUCGACACUAGUAGUUGGCGCGACACUCAGCGCACCAAACA
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GAACUUAAUAUUGAAAUGACA--| C C U C U CU UUUAAUUUU
CCGACU CU GUGUU GG GA UGAAC GGAUU C
GGUUGA GA CACAG UC CU ACUUG UCUAA G
ACAAACCACGCGACUCACAGCGC^ U U C - U -- AGAGCAUGA
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
|
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| Star sequence |
Dan-Mir-973_5p* (predicted) |
| mirBase accession | None |
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| Sequence |
0- CGUGUUUGGCGAUUGAACCUGGAUU -25
Get sequence
|
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| Mature sequence |
Dan-Mir-973_3p |
| mirBase accession | None |
|---|
| Sequence |
47- UCUGUUCAUUCCUCGACACUAG -69
Get sequence
|
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