| MirGeneDB ID | Dan-Mir-970 |
| Family name |
MIR-970 (all species) |
| Seed |
CAUAAGA |
| Species |
Fruit fly (Drosophila ananassae) |
| MiRBase ID |
|
| Paralogues |
|
| Orthologues |
Aae-Mir-970
Dme-Mir-970
Dmo-Mir-970
Dsi-Mir-970
Dya-Mir-970
Hme-Mir-970
Tca-Mir-970
|
| Node of Origin (locus) |
Endopterygota
|
| Node of Origin (family) |
Endopterygota
|
Genome context (Dana_caf1) |
scaffold_13117: 3438256-3438320 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UUUUUUUAGUGGAAGAAAGGCAUUUGUUGCAGCUAGCGGGUGUUUUAUUUGGUAGCUGAUAUCGAAAGAAUCUAUCAUAAGACACACGCGGCUAUAAUCGAUGUCCUUAGAGUCUACAAGCUAAA
Get precursor sequence
|
| Structure | 10 20 30 40 50 60
UUUUUUUAGUGGAAGAAA--| U C A G UU GCUGAUAU
GGCAUU GUUG AGCU GCG GUGUUUUA UGGUA C
CUGUAG UAAU UCGG CGC CACAGAAU ACUAU G
AAAUCGAACAUCUGAGAUUC^ C A - A -- CUAAGAAA
120 110 100 90 80 70 |
| Deep sequencing |
Go to detailed chart
|
| 3' NTU |
No
|
| Motifs | No |
Tissue expression
|
|
| Star sequence |
Dan-Mir-970_5p* |
| mirBase accession | None |
| Sequence |
0- AGCUAGCGGGUGUUUUAUUUGGUA -24
Get sequence
|
| Mature sequence |
Dan-Mir-970_3p |
| mirBase accession | None |
| Sequence |
44- UCAUAAGACACACGCGGCUAU -65
Get sequence
|