| MirGeneDB ID | Csc-Mir-276-P11a |
|---|
| Family name |
MIR-276 (all species) |
|---|
| Seed |
AGGAACU |
|---|
| Species |
Arizona bark scorpion (Centruroides sculpturatus) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Csc-Mir-276-P10
Csc-Mir-276-P11b
|
|---|
| Orthologues |
Bge-Mir-276
Dma-Mir-276
Dpu-Mir-276
Hme-Mir-276
Isc-Mir-276
Tca-Mir-276
|
|---|
| Node of Origin (locus) |
C. sculpturatus
|
|---|
| Node of Origin (family) |
Arthropoda
|
|---|
Genome context
(GCF_000671375.1_CSC) |
NW_019385219.1: 166756-166813 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
CGCUUCGUCUGCAAGGGUUGGUUUAUCCCGAGCGAGGUAUGGAGUUCUUACUGUGUGUACAGCUGGUAGGAACUUCAUACCAUGCUCGUGAUAAUUCUCAACACACCAACGAUAAGGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CGCUUCGUCUGCAAGGGUU--|GU C A GUGUG
G UUAUC CGAGCG GGUAUGGAGUUCUUACU U
C AAUAG GCUCGU CCAUACUUCAAGGAUGG A
AGGAAUAGCAACCACACAACU^UU U A UCGAC
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | CNNC at 3p(+17), UGUG in loop |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Csc-Mir-276-P11a_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGCGAGGUAUGGAGUUCUUACU -22
Get sequence
|
|---|
| Mature sequence |
Csc-Mir-276-P11a_3p |
| mirBase accession | None |
|---|
| Sequence |
36- UAGGAACUUCAUACCAUGCUCG -58
Get sequence
|
|---|
