| MirGeneDB ID | Cpo-Mir-760 |
|---|
| Family name |
MIR-760 (all species) |
|---|
| Seed |
GGCUCUG |
|---|
| Species |
Guinea pig (Cavia porcellus) |
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| MiRBase ID |
cpo-mir-760
|
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| Paralogues |
|
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| Orthologues |
Bta-Mir-760
Dno-Mir-760
Ete-Mir-760
Hsa-Mir-760
Mml-Mir-760
Mmu-Mir-760
Ocu-Mir-760
Rno-Mir-760
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
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Genome context
(cavPor3) |
scaffold_2: 19580893-19580952 [+]
UCSC
|
|---|
Precursor
(pre-Mir +30nt flank) |
CGGGUGAGGCCGCGGCGCAGGGUACGGCGCCCCCCUCAGUCUGCCAGAGCCCGGAUGCCUCAGAAAUUCGGCUCUGGGUCUGUGGGGGACGAAAUGCAACCCAGUCUCCAUUUUCCUGAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CGGGUGAGGCCGCGGCGCA ACGG---| C U U UG C UGCCU
GGGU CG CCCCC CAG C CCAGAGCC GGA \
CCCA GC GGGGG GUC G GGUCUCGG CUU C
AAGUCCUUUUACCUCUGA- ACGUAAA^ A U U -- - AAAGA
. 110 100 90 80 70 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
|---|
| Star sequence |
Cpo-Mir-760_5p* (predicted) |
| mirBase accession | MIMAT0047383 |
|---|
| Sequence |
0- CCCCCUCAGUCUGCCAGAGCCCGGA -25
Get sequence
|
|---|
| Mature sequence |
Cpo-Mir-760_3p (predicted) |
| mirBase accession | MIMAT0047384 |
|---|
| Sequence |
38- CGGCUCUGGGUCUGUGGGGGAC -60
Get sequence
|
|---|
