| MirGeneDB ID | Cmi-Mir-92-P2b |
| Family name |
MIR-92 (all species) |
| Seed |
AUUGCAC |
| Species |
Australian ghostshark (Callorhinchus milii) |
| MiRBase ID |
|
| Paralogues |
Cmi-Mir-92-P1a
Cmi-Mir-92-P1b
Cmi-Mir-92-P1c
Cmi-Mir-92-P1d
Cmi-Mir-92-P2a
Cmi-Mir-92-P2c
Cmi-Mir-92-P2d
|
| Orthologues |
Asu-Mir-92
Bfl-Mir-92-o2
Bla-Mir-92-o2
Cel-Mir-92
Esc-Mir-92
Isc-Mir-92
Obi-Mir-92
Sme-Mir-92
Sto-Mir-92-P2b
|
| Node of Origin (locus) |
Gnathostomata
|
| Node of Origin (family) |
Bilateria
|
Genome context (GCA_000165045.2_Callorhinchus_milii-6.1.3) |
KI635855.1: 9359771-9359830 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CCAGGAAGCUCAAGACUAGCCAGUGUUGAGAGGCGGAGACUGGAGCAAUUGCUGGGUUUCCCGUGAAGCAUUGCACUUGUCUCGGUCCGACAGUGCUGGUACAACACUACCACUCGGUAA
Get precursor sequence
|
| Structure | 10 20 30 40 50
CCAGGAAGCUCAAGACUA--| UG AGA G U A U GGGUUU
GCCAG UUG GGC GAGAC GG GCAAU GCU \
UGGUC GAC CUG CUCUG UC CGUUA CGA C
AAUGGCUCACCAUCACAACA^ GU AGC G U A - AGUGCC
. 110 100 90 80 70 |
| Deep sequencing |
Go to detailed chart
|
| 3' NTU |
No
|
| Motifs | CNNC at 3p(+17) |
Tissue expression
|
| Bl |
Br |
Ey |
Gi |
Gl |
He |
In |
Ki |
Li |
Mu |
Ov |
Pa |
Sk |
Sp |
Te |
Ut |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Star sequence |
Cmi-Mir-92-P2b_5p* |
| mirBase accession | None |
| Sequence |
0- AGGCGGAGACUGGAGCAAUUGCU -23
Get sequence
|
| Mature sequence |
Cmi-Mir-92-P2b_3p |
| mirBase accession | None |
| Sequence |
38- CAUUGCACUUGUCUCGGUCCGA -60
Get sequence
|