| MirGeneDB ID | Cmi-Mir-203-P6-v2 |
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| Family name |
MIR-203 (all species) |
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| Seed |
GAAAUGU |
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| Species |
Australian ghostshark (Callorhinchus milii) |
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| MiRBase ID |
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| Paralogues |
Cmi-Mir-203-P5-v1
Cmi-Mir-203-P5-v2
Cmi-Mir-203-P6-v1
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| Orthologues |
Lch-Mir-203
Spt-Mir-203
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| Node of Origin (locus) |
C. milii
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| Node of Origin (family) |
Vertebrata
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Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3) |
KI635863.1: 10840677-10840736 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CAAUGUAUUGUGUGAAAGUCCUUUGGGUGCAGUGGUUUUCAACAGUUCAACAGUUCUUUAUUAACAUUGUGAAAUGUUUAGGACCACUUGAUCCAAAGAACAAUUACAUCAAACACACCU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
CAAUGUAUUGUGUGAAA--| C GC C G A GUUCUUU
GU CUUUGGGU AGUGGUUUU AACA UUCA CA \
CA GAAACCUA UCACCAGGA UUGU AAGU GU A
UCCACACAAACUACAUUAA^ A GU U A - UACAAUU
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Yes
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Bl |
Br |
Ey |
Gi |
Gl |
He |
In |
Ki |
Li |
Mu |
Ov |
Pa |
Sk |
Sp |
Te |
Ut |
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| Star sequence |
Cmi-Mir-203-P6-v2_5p* |
| mirBase accession | None |
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| Sequence |
0- AGUGGUUUUCAACAGUUCAACA -22
Get sequence
|
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| Mature sequence |
Cmi-Mir-203-P6-v2_3p |
| mirBase accession | None |
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| Sequence |
39- UGAAAUGUUUAGGACCACUUG -60
Get sequence
|
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