MirGeneDB 2.1
MirGeneDB ID

Cgi-Mir-76

Family name MIR-76 (all species)
Seed UCGUUGU
Species Pacific oyster (Crassostrea gigas)
MiRBase ID
Paralogues
Orthologues Aae-Mir-76  Asu-Mir-76  Bge-Mir-76  Bpl-Mir-76  Cbr-Mir-76  Cel-Mir-76  Cte-Mir-76  Dan-Mir-76  Dma-Mir-76  Dme-Mir-76  Dmo-Mir-76  Dpu-Mir-76  Dsi-Mir-76  Dya-Mir-76  Efe-Mir-76  Esc-Mir-76  Hme-Mir-76  Isc-Mir-76  Lan-Mir-76-P1  Lan-Mir-76-P2  Lgi-Mir-76  Lpo-Mir-76-P3  Lpo-Mir-76-P4  Lpo-Mir-76-P5  Lpo-Mir-76-P6  Lpo-Mir-76-P7  Lpo-Mir-76-P8  Npo-Mir-76  Obi-Mir-76  Ovu-Mir-76  Pmi-Mir-76  Sme-Mir-76-P9a  Sme-Mir-76-P9b  Spu-Mir-76  Tca-Mir-76 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(CGI_GCA_000297895.1)		 scaffold547: 522573-522634 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AUUUAUUGUAUAUCAGAUUGAACUAUUUUGACGGGUUUCGCGAUCGAUGAACAUUAAACAAAGUAUCUGUUCGUUGUCGUCGAAACCUGCCUUAAAUAGUGAUAUGACGCGUCUGUACUUUC
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Structure
        10        20         30         40         50        60
AUUUAUUGUAUAUCAGAUUGA-       UGA-         -|  U         UUAAAC 
                      ACUAUUU    CGGGUUUCG CGA CGAUGAACA      A
                      UGAUAAA    GUCCAAAGC GCU GUUGCUUGU      A
CUUUCAUGUCUGCGCAGUAUAG       UUCC         U^  -         CUAUGA 
120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
A- D- D- Eg F- Gi He Ju L- Ma Ma Pe Re Sp Um Ea Fe Ha La Ma
Star sequence

Cgi-Mir-76_5p*
mirBase accessionNone
Sequence 
0- ACGGGUUUCGCGAUCGAUGAACA -23
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Mature sequence

Cgi-Mir-76_3p
mirBase accessionNone
Sequence 
39- UUCGUUGUCGUCGAAACCUGCCU -62
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