| MirGeneDB ID | Cfa-Mir-935-v2 |
|---|
| Family name |
MIR-935 (all species) |
|---|
| Seed |
CAGUUAC |
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| Species |
Dog (Canis familiaris) |
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| MiRBase ID |
|
|---|
| Paralogues |
Cfa-Mir-935-v1
|
|---|
| Orthologues |
Bta-Mir-935-v2
Dno-Mir-935-v2
Hsa-Mir-935-v2
Mml-Mir-935-v2
Mmu-Mir-935-v2
Ocu-Mir-935-v2
Rno-Mir-935-v2
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
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Genome context
(canFam3_add) |
chr1: 103250645-103250704 [-]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
CUGCUCAAGGCCGGCGGGGGCGCGGGCGGCAGUGGCGGGAGCGGCCCCUCGGCCAUCCUCCGUCUGCCCAGUUACCGCUUCCGCUACCGCCGCCGCUCCCGCUCUAGCUCCCGCUCCAGC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CUGCUCAAGGCCGGCGG---| C G A CCC C CAUCC
GGG GCGG CGGC GUGGCGGGAGCGG CU GGC U
CCC CGCC GCCG CAUCGCCUUCGCC GA CCG C
CGACCUCGCCCUCGAUCUCG^ U - C AUU C UCUGC
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
| Bl |
Ce |
Co |
He |
Hy |
Ki |
Ki |
Li |
Lu |
Ov |
Sk |
Te |
Te |
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| Star sequence |
Cfa-Mir-935-v2_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGUGGCGGGAGCGGCCCCUCGGC -23
Get sequence
|
|---|
| Mature sequence |
Cfa-Mir-935-v2_3p |
| mirBase accession | None |
|---|
| Sequence |
37- CCAGUUACCGCUUCCGCUACCGC -60
Get sequence
|
|---|
