MirGeneDB 2.1
MirGeneDB ID

Cfa-Mir-885

Family name MIR-885 (all species)
Seed CCAUUAC
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-885
Paralogues
Orthologues Bta-Mir-885  Cpo-Mir-885  Dno-Mir-885  Hsa-Mir-885  Mml-Mir-885  Ocu-Mir-885 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)		 chr20: 7968539-7968592 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGCCCAGUCUGCCGCUCGGCCCGCGCUCUCUCCAUUACACUACCCUGCCUCUUCUCCAUGAGAGGCAGCGGGGUGUAGUGGAUAGAGCACGGGUUCAAGUCCCGGCUCUACCAC
Get precursor sequence
Structure
        10          20        30        40         50      
GGCCCAGUCUGCCGCUC--|     C     C           A  -        UCU 
                   GGCCCG GCUCU UCCAUUACACU CC CUGCCUCU   C
                   UUGGGC CGAGA AGGUGAUGUGG GG GACGGAGA   C
CACCAUCUCGGCCCUGAAC^     A     U           -  C        GUA 
  110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Bl Ce Co He Hy Ki Ki Li Lu Ov Sk Te Te
Mature sequence

Cfa-Mir-885_5p
mirBase accessionMIMAT0009933
Sequence 
0- UCCAUUACACUACCCUGCCUCU -22
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Proposed targets TargetScanVert: cfa-miR-885
miRDB: MIMAT0009933
Star sequence

Cfa-Mir-885_3p*
mirBase accessionNone
Sequence 
32- AGGCAGCGGGGUGUAGUGGAUA -54
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