| MirGeneDB ID | Cfa-Mir-430-P7d2 |
|---|
| Family name |
MIR-430 (all species) |
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| Seed |
AAGUGCU |
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| Species |
Dog (Canis familiaris) |
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| MiRBase ID |
|
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| Paralogues |
Cfa-Mir-430-P1
Cfa-Mir-430-P2
Cfa-Mir-430-P3
Cfa-Mir-430-P4
Cfa-Mir-430-P5d1
Cfa-Mir-430-P5d2
Cfa-Mir-430-P7d1
|
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| Orthologues |
Bta-Mir-430-P7
Hsa-Mir-430-P7
Mml-Mir-430-P7
Xtr-Mir-430-o7
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| Node of Origin (locus) |
C. familiaris
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| Node of Origin (family) |
Vertebrata
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Genome context
(canFam3_add) |
chr1: 103406123-103406177 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UCCAGGAGCAGAUUCCGCUCAGACUGGGAUACACAAAAUGAGGGCACUUCCCGAUCUGUCUGGAAAGUGCUCCCACUUUGUGUGUCCUUGUCUGAGGAAAGCAUCCUUGUCCCAC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UCCAGGAGCAGAUUCCG--| U A A C GAUC
CUCAGAC GGGAUACACAAA UG GGGCACUU CC \
GAGUCUG UCCUGUGUGUUU AC CUCGUGAA GG U
CACCCUGUUCCUACGAAAG^ U C C A UCUG
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
| Bl |
Ce |
Co |
He |
Hy |
Ki |
Ki |
Li |
Lu |
Ov |
Sk |
Te |
Te |
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| Star sequence |
Cfa-Mir-430-P7d2_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- ACACAAAAUGAGGGCACUUCCC -22
Get sequence
|
|---|
| Mature sequence |
Cfa-Mir-430-P7d2_3p |
| mirBase accession | None |
|---|
| Sequence |
33- AAAGUGCUCCCACUUUGUGUGU -55
Get sequence
|
|---|
