MirGeneDB 2.1
MirGeneDB ID

Cfa-Mir-197

Family name MIR-197 (all species)
Seed UCACCAC
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-197
Paralogues
Orthologues Bta-Mir-197  Cpo-Mir-197  Dno-Mir-197  Hsa-Mir-197  Mml-Mir-197  Ocu-Mir-197 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)		 chr6: 42271719-42271779 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUACUGGAAUCUGUGCUCCGGGGGCUGUGCCGGGUAGAGAGGGCAGUGGGAGGUAAGAGCUCUUCACCCUUCACCACCUUCUCCACCCAGCAUGGCCGGCACACUAUGGUCUACGGCACAU
Get precursor sequence
Structure
        10        20          30        40        50          
CUACUGGAAUCUGUGCUCCGGG--|       C    A       CA    GA  UAAGAG 
                        GGCUGUGC GGGU GAGAGGG  GUGG  GG      \
                        CCGGUACG CCCA CUCUUCC  CACU  CC      C
UACACGGCAUCUGGUAUCACACGG^       A    C       AC    UC  ACUUCU 
 .       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Bl Ce Co He Hy Ki Ki Li Lu Ov Sk Te Te
Star sequence

Cfa-Mir-197_5p*
mirBase accessionNone
Sequence 
0- CGGGUAGAGAGGGCAGUGGGAGG -23
Get sequence
Mature sequence

Cfa-Mir-197_3p
mirBase accessionMIMAT0006698
Sequence 
39- UUCACCACCUUCUCCACCCAGC -61
Get sequence
Proposed targets TargetScanVert: cfa-miR-197
miRDB: MIMAT0006698