| MirGeneDB ID | Cbr-Mir-355 |
|---|
| Family name |
MIR-355 (all species) |
|---|
| Seed |
UUGUUUU |
|---|
| Species |
Roundworm (Caenorhabditis briggsae) |
|---|
| MiRBase ID |
cbr-mir-355
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Cel-Mir-355
|
|---|
| Node of Origin (locus) |
Caenorhabditis
|
|---|
| Node of Origin (family) |
Caenorhabditis
|
|---|
Genome context
(CB4) |
II: 7347353-7347411 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
ACUGAUUAUGAUUAGUCAGCAAUCGGAUGGUUUGUUUUAGCCUGAGCUAUGUGUUAUUGCAUAUUCAUAGCUACUUGCUAAAACAUACCAAUCGAGUUGACUGACAUUCUUUGUUAUAC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
ACUGAUUAUGAUUAGUCAG- - A U CUG-| UGUUAU
CAA UCGG UGGU UGUUUUAGC AGCUAUG U
GUU AGCU ACCA ACAAAAUCG UCGAUAC G
CAUAUUGUUUCUUACAGUCA G A U UUCA^ UUAUAC
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | UGUG in loop |
|---|
Tissue expression
|
| 01 |
02 |
03 |
04 |
05 |
06 |
07 |
08 |
09 |
10 |
11 |
12 |
13 |
14 |
15 |
16 |
Cb |
Ea |
Ma |
Yo |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Mature sequence |
Cbr-Mir-355_5p |
| mirBase accession | MIMAT0001319 |
|---|
| Sequence |
0- UUUGUUUUAGCCUGAGCUAUG -21
Get sequence
|
|---|
| Star sequence |
Cbr-Mir-355_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
37- UAGCUACUUGCUAAAACAUACC -59
Get sequence
|
|---|
