| MirGeneDB ID | Cbr-Let-7-P6 |
|---|
| Family name |
LET-7 (all species) |
|---|
| Seed |
GAGGUAG |
|---|
| Species |
Roundworm (Caenorhabditis briggsae) |
|---|
| MiRBase ID |
cbr-mir-84
|
|---|
| Paralogues |
Cbr-Let-7-P5
Cbr-Let-7-P7
Cbr-Let-7-P8
|
|---|
| Orthologues |
Aae-Let-7
Asu-Let-7-P6
Bge-Let-7
Bpl-Let-7
Cel-Let-7-P6
Cgi-Let-7
Cte-Let-7
Dan-Let-7
Dma-Let-7
Dme-Let-7
Dmo-Let-7
Dpu-Let-7
Dsi-Let-7
Dya-Let-7
Esc-Let-7
Hme-Let-7
Isc-Let-7
Lan-Let-7
Lgi-Let-7
Npo-Let-7
Obi-Let-7
Ovu-Let-7
Pfl-Let-7
Pmi-Let-7
Sko-Let-7
Spu-Let-7
Tca-Let-7
Xbo-Let-7
|
|---|
| Node of Origin (locus) |
Chromadorea
|
|---|
| Node of Origin (family) |
Bilateria
|
|---|
Genome context
(CB4) |
X: 796081-796142 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UAUUCAGCCGUACUGUCUGAAAAUAACAUCUGAGGUAGUUUGCAAUGCUGUCGACGUAACUGAAAAGUCAACAUCAUUCCAACUUCCUCGGCUGUUCAAAAGGCUAGACAUUUUAAAGGAAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UAUUCAGCCGUACUGUCUGAAAAU--| U U U C C C ACGUAAC
AACA CUGAGG AGUU G AAUG UGU G \
UUGU GGCUCC UCAA C UUAC ACA C U
UAAGGAAAUUUUACAGAUCGGAAAAC^ C U - C U A UGAAAAG
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
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| 01 |
02 |
03 |
04 |
05 |
06 |
07 |
08 |
09 |
10 |
11 |
12 |
13 |
14 |
15 |
16 |
Cb |
Ea |
Ma |
Yo |
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| Mature sequence |
Cbr-Let-7-P6_5p |
| mirBase accession | MIMAT0001311 |
|---|
| Sequence |
0- UGAGGUAGUUUGCAAUGCUGUCG -23
Get sequence
|
|---|
| Star sequence |
Cbr-Let-7-P6_3p* |
| mirBase accession | None |
|---|
| Sequence |
40- ACAUCAUUCCAACUUCCUCGGC -62
Get sequence
|
|---|
