MirGeneDB 2.1
MirGeneDB ID

Bpl-Mir-7-P18

Family name MIR-7 (all species)
Seed GGAAGAC
Species Rotifer (Brachionus plicatilis)
MiRBase ID
Paralogues Bpl-Mir-7-P19 
Orthologues Aae-Mir-7  Asu-Mir-7  Bfl-Mir-7  Bge-Mir-7  Bla-Mir-7  Cgi-Mir-7  Cin-Mir-7  Cte-Mir-7  Dan-Mir-7  Dma-Mir-7  Dme-Mir-7  Dmo-Mir-7  Dsi-Mir-7  Dya-Mir-7  Esc-Mir-7  Hme-Mir-7  Isc-Mir-7  Lan-Mir-7  Lgi-Mir-7  Lpo-Mir-7  Npo-Mir-7  Obi-Mir-7  Ovu-Mir-7  Pfl-Mir-7  Pmi-Mir-7  Sko-Mir-7  Spu-Mir-7  Tca-Mir-7  Xbo-Mir-7 
Node of Origin (locus) B. plicatilis
Node of Origin (family) Bilateria
Genome context
(Bpl_ASM1027981)		 QEOQ01000688.1: 553513-553572 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AUUAAUCCAAAUAAAAUAGAAUAUGUAAGCUGGAAGACCAGUGAUUUUGUGUUCAGAAAAUUCAAAACACAAGAUUCUGCGUCUUCGAACCUUACAUGUUUAUCUAACAACUAACAAUUU
Get precursor sequence
Structure
        10         20        30          40        50         
AUUAAUCCAAAUAAAAUA-           CUG-      -|  U           CAGAA 
                   GAAUAUGUAAG    GAAGAC CAG GAUUUUGUGUU     A
                   UUUGUACAUUC    CUUCUG GUC UUAGAACACAA     A
UUUAACAAUCAACAAUCUA           CAAG      C^  -           AACUU 
.       110       100        90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Bpl-Mir-7-P18_5p
mirBase accessionNone
Sequence 
0- UGGAAGACCAGUGAUUUUGUGUU -23
Get sequence
Star sequence

Bpl-Mir-7-P18_3p* (predicted)
mirBase accessionNone
Sequence 
37- CACAAGAUUCUGCGUCUUCGAAC -60
Get sequence