| MirGeneDB ID | Bla-Novel-12 |
|---|
| Family name |
BLA-NOVEL-12 (all species) |
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| Seed |
CACUGCU |
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| Species |
European lancelet (Branchiostoma lanceolatum) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
B. lanceolatum
|
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| Node of Origin (family) |
B. lanceolatum
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Genome context
(BraLan2) |
Sc0000058: 970510-970567 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AUUUAUUGCUUCAUGAUACUGAGAGUGAAUUACGGCUCCUCUAGCCGUGGUUGUCUAUCAAACUAGCCACUGCUUGAUGGGCCGAAGUUCAAUCUACAGAACACAGCAACUACUAGUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AUUUAUUGCUUCAUGAUA- -| G A C U C GUCUA
CUG AGA UGAAUU CGGCUC UC AGC GUGGUU U
GAC UCU ACUUGA GCCGGG AG UCG CACCGA C
CUGAUCAUCAACGACACAA A^ A A U U U UCAAA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Bla-Novel-12_5p* |
| mirBase accession | None |
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| Sequence |
0- UACGGCUCCUCUAGCCGUGGUU -22
Get sequence
|
|---|
| Mature sequence |
Bla-Novel-12_3p |
| mirBase accession | None |
|---|
| Sequence |
36- CCACUGCUUGAUGGGCCGAAGU -58
Get sequence
|
|---|
