| MirGeneDB ID | Bla-Mir-4866 |
|---|
| Family name |
MIR-4866 (all species) |
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| Seed |
CACACUU |
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| Species |
European lancelet (Branchiostoma lanceolatum) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Bfl-Mir-4866
|
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| Node of Origin (locus) |
Branchiostoma
|
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| Node of Origin (family) |
Branchiostoma
|
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Genome context
(BraLan2) |
Sc0000043: 1850222-1850278 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UACAUAUCUGCAGUGCUAGACCUGUACCCAUCACACUUGUACUUCUUAGCAUGUGGCACAGGGAUGCUUAGCAGUGCAAGUGUGACAGGUAUGGUGUUUCCUUCUCUUCUCGACGGU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UACAUAUCUGCAGUGCU- -| CA U U GUGGC
AGAC CUGUACC UCACACUUGUACU CU AGCAU \
UUUG GGUAUGG AGUGUGAACGUGA GA UCGUA A
UGGCAGCUCUUCUCUUCC U^ AC C U GGGAC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UGUG in loop |
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Tissue expression
|
|
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| Mature sequence |
Bla-Mir-4866_5p |
| mirBase accession | None |
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| Sequence |
0- UCACACUUGUACUUCUUAGCAU -22
Get sequence
|
|---|
| Star sequence |
Bla-Mir-4866_3p* |
| mirBase accession | None |
|---|
| Sequence |
35- GCUUAGCAGUGCAAGUGUGACA -57
Get sequence
|
|---|
