| MirGeneDB ID | Bla-Mir-4857 |
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| Family name |
MIR-4857 (all species) |
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| Seed |
CGAUGUU |
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| Species |
European lancelet (Branchiostoma lanceolatum) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Bfl-Mir-4857
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| Node of Origin (locus) |
Branchiostoma
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| Node of Origin (family) |
Branchiostoma
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Genome context
(BraLan2) |
Sc0000022: 2100339-2100402 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CAAGCCCGUCGUACGAUACCAGUUGUGGUCACGAUGUUUUUGUCUGCUCCAGAGGUGAGUUAUCGCGACUUUGGGACAGACGAAACAUCUCAGACCAACGCUGGGCAUGACAACCUGGCCACGA
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
CAAGCCCGUCGUACGAUA-- UG AC-| U CU GGUGAGU
CCAGU UGGUC GAUGUUUU GUCUG CCAGA U
GGUCG ACCAG CUACAAAG CAGAC GGUUU A
AGCACCGGUCCAACAGUACG CA ACU^ - AG CAGCGCU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
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| Mature sequence |
Bla-Mir-4857_5p |
| mirBase accession | None |
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| Sequence |
0- ACGAUGUUUUUGUCUGCUCCAGA -23
Get sequence
|
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| Star sequence |
Bla-Mir-4857_3p* |
| mirBase accession | None |
|---|
| Sequence |
41- UGGGACAGACGAAACAUCUCAGA -64
Get sequence
|
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