| MirGeneDB ID | Bla-Mir-2072 |
|---|
| Family name |
MIR-2072 (all species) |
|---|
| Seed |
GCAACAU |
|---|
| Species |
European lancelet (Branchiostoma lanceolatum) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
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| Orthologues |
Bfl-Mir-2072
|
|---|
| Node of Origin (locus) |
Branchiostoma
|
|---|
| Node of Origin (family) |
Branchiostoma
|
|---|
Genome context
(BraLan2) |
Sc0000547: 18221-18276 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UGUCUUGCCUAGAAGAGGGCCUUGUCUUGCUGCAACAUCACAGUGACCACAUAGGAGAGUCAAUGUGAGCACUGCGAUGUGGUAUUAAGAUCUGGCCAUGCCACACAGUUAAUCAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UGUCUUGCCUAGAAGAG--| UU C A A AC AGGA
GGCC GUCUUG UGC ACAUC CAGUG CACAU G
CCGG UAGAAU AUG UGUAG GUCAC GUGUA A
GACUAAUUGACACACCGUA^ UC U G C GA ACUG
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
|
|---|
| Mature sequence |
Bla-Mir-2072_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UGCAACAUCACAGUGACCACAU -22
Get sequence
|
|---|
| Star sequence |
Bla-Mir-2072_3p* |
| mirBase accession | None |
|---|
| Sequence |
34- GUGAGCACUGCGAUGUGGUAUU -56
Get sequence
|
|---|
