| MirGeneDB ID | Bla-Mir-103-P8 |
| Family name |
MIR-103 (all species) |
| Seed |
AGCAGCA |
| Species |
European lancelet (Branchiostoma lanceolatum) |
| MiRBase ID |
|
| Paralogues |
Bla-Mir-103-P5
Bla-Mir-103-P6
Bla-Mir-103-P7
|
| Orthologues |
Bfl-Mir-103-P8
Pfl-Mir-103
Pmi-Mir-103
Sko-Mir-103
Spu-Mir-103
Xbo-Mir-103
|
| Node of Origin (locus) |
Branchiostoma
|
| Node of Origin (family) |
Deuterostomia
|
Genome context (BraLan2) |
Sc0000082: 843372-843431 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AAGGAAGCCUGAUCCCUCAUCCAUGUUUCAACUGUUGCAUCUUGCUGCCUUUAGAACCUUCCAUCCAUAAAGCAGCAGUAUGCAAUGGUGAAAAAUGGAUGCCAUGAUUCAGCUGUAGAU
Get precursor sequence
|
| Structure | 10 20 30 40 50
AAGGAAGCCUGAUCCCU--| G A C CUUUAGAACCU
CAUCCAU UUUCA CUGUUGCAU UUGCUGC \
GUAGGUA AAAGU GGUAACGUA GACGACG U
UAGAUGUCGACUUAGUACC^ A - U AAAUACCUACC
. 110 100 90 80 70 |
| Deep sequencing |
Go to detailed chart
|
| 3' NTU |
Yes
|
| Motifs | No |
Tissue expression
|
|
| Star sequence |
Bla-Mir-103-P8_5p* |
| mirBase accession | None |
| Sequence |
0- ACUGUUGCAUCUUGCUGCCUUU -22
Get sequence
|
| Mature sequence |
Bla-Mir-103-P8_3p |
| mirBase accession | None |
| Sequence |
39- AAGCAGCAGUAUGCAAUGGUG -60
Get sequence
|