| MirGeneDB ID | Bge-Novel-7 |
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| Family name |
BGE-NOVEL-7 (all species) |
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| Seed |
UCAGUUC |
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| Species |
Cockroach (Blattella germanica) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
B. germanica
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| Node of Origin (family) |
B. germanica
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Genome context
(Bger_2.0) |
KZ614500.1: 22408-22466 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AGAAAGAACGUUUCUGUGCUGAGUUAAGUGUUCAGUUCUCUUUACCUUUUACUUUGAAUUUGAUUAGUAAAGGGCUAAGAUGACUGGCACUUCGCUAAGUAUACUCCUACGUCAUUGGA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AGAAAGAACGUUUCUGU--| G U U C UA UUGAA
GCU AGU AAGUGU CAGUU UCUU CCUUUUACU U
UGA UCG UUCACG GUCAG AGAA GGGAAAUGA U
AGGUUACUGCAUCCUCAUA^ A C - U UC UUAGU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Ad |
Ad |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
Co |
Co |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
No |
No |
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| Mature sequence |
Bge-Novel-7_5p |
| mirBase accession | None |
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| Sequence |
0- UUCAGUUCUCUUUACCUUUUACU -23
Get sequence
|
|---|
| Star sequence |
Bge-Novel-7_3p* |
| mirBase accession | None |
|---|
| Sequence |
37- UAAAGGGCUAAGAUGACUGGCA -59
Get sequence
|
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