| MirGeneDB ID | Bge-Novel-23 |
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| Family name |
BGE-NOVEL-23 (all species) |
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| Seed |
AGAGAAA |
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| Species |
Cockroach (Blattella germanica) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
B. germanica
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| Node of Origin (family) |
B. germanica
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Genome context
(Bger_2.0) |
KZ615746.1: 115738-115795 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UCAUAGAAGAAAUUGGUCUCUGUAAUCUUGUAGAGAAACUAAAGCAUAUGUCUUGCUAUUUAAUGCCAUAUGUUUCAUUUUCUCUAUUAGCAACAAGAGGUUAUCAGCUGCAUUGCAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UCAUAGAAGAAAUUGGU--| GUAAU U CUA UCUUGCU
CUCU CU GUAGAGAAA AAGCAUAUG A
GAGA GA UAUCUCUUU UUUGUAUAC U
AACGUUACGUCGACUAUUG^ ACAAC U UAC CGUAAUU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ad |
Ad |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
Co |
Co |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
No |
No |
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| Mature sequence |
Bge-Novel-23_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UAGAGAAACUAAAGCAUAUGUC -22
Get sequence
|
|---|
| Co-mature sequence |
Bge-Novel-23_3p |
| mirBase accession | None |
|---|
| Sequence |
36- CAUAUGUUUCAUUUUCUCUAUU -58
Get sequence
|
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