MirGeneDB 2.1
MirGeneDB ID

Bge-Mir-9-o11-v2

Family name MIR-9 (all species)
Seed UUUGGUG
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues Bge-Mir-9-o11-v1  Bge-Mir-9-o12  Bge-Mir-9-o13  Bge-Mir-9-o14 
Orthologues Aae-Mir-9-P11  Bfl-Mir-9  Bla-Mir-9  Bpl-Mir-9  Cin-Mir-9  Cte-Mir-9  Dan-Mir-9-P11  Dme-Mir-9-P11  Dmo-Mir-9-P11  Dsi-Mir-9-P11  Dya-Mir-9-P11  Esc-Mir-9  Isc-Mir-9  Lan-Mir-9  Lgi-Mir-9  Npo-Mir-9  Obi-Mir-9  Ovu-Mir-9  Pmi-Mir-9  Spu-Mir-9  Xbo-Mir-9 
Node of Origin (locus) B. germanica
Node of Origin (family) Bilateria
Genome context
(Bger_2.0)		 KZ614731.1: 668641-668699 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CGUAGUUAGCAAGAGCAGCAUUUGUCUCUUCUUUGGUGAUGUAGCUGUAUGAUUGCUGUAGAAGGUCAUAAAGCUAGAUUACCAAAGCAGAGACAUUGGCUAAAUCAACGAACUGACUU
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Structure
        10          20        30        40        50         
CGUAGUUAGCAAGAGCA--| AUU       U          G     G      UGCUG 
                   GC   UGUCUCU CUUUGGUGAU UAGCU UAUGAU     \
                   CG   ACAGAGA GAAACCAUUA AUCGA AUACUG     U
UUCAGUCAAGCAACUAAAU^ GUU       C          G     A      GAAGA 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Ad Ny Ny Ny Ny Ny Ny Ny Ny Ov Co Co Em Em Em Em Em Em Em Em Em Em No No
Mature sequence

Bge-Mir-9-o11-v2_5p
mirBase accessionNone
Sequence 
0- CUUUGGUGAUGUAGCUGUAUGAU -23
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Co-mature sequence

Bge-Mir-9-o11-v2_3p
mirBase accessionNone
Sequence 
37- AUAAAGCUAGAUUACCAAAGCA -59
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