| MirGeneDB ID | Bge-Mir-3-P28a-v1 |
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| Family name |
MIR-3 (all species) |
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| Seed |
CACUGGG |
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| Species |
Cockroach (Blattella germanica) |
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| MiRBase ID |
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| Paralogues |
Bge-Mir-3-P28a-v2
Bge-Mir-3-P28b-v1
Bge-Mir-3-P28b-v2
Bge-Mir-3-P29-v1
Bge-Mir-3-P29-v2
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| Orthologues |
Dma-Mir-3
Dpu-Mir-3
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| Node of Origin (locus) |
B. germanica
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| Node of Origin (family) |
Pancrustacea
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Genome context
(Bger_2.0) |
KZ618317.1: 56244-56302 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AAGAGAGGGUCAUACGCACUAGUGGUGGGUGAUAGUGACUCCCCAAGUGAUGCUACAUUCUGAACGUAUCACUGGGAAGACAUUAUCGUUAGCUACAAGUGAAAAGCAACAAACUAAAA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AAGAGAGGGUCAUACGC--| A GG A C A CUACAU
ACU GUGGU GUGAUAGUG CU CCCA GUGAUG U
UGA CAUCG UGCUAUUAC GA GGGU CACUAU C
AAAAUCAAACAACGAAAAG^ A AU A A - GCAAGU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ad |
Ad |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
Co |
Co |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
No |
No |
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| Star sequence |
Bge-Mir-3-P28a-v1_5p* |
| mirBase accession | None |
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| Sequence |
0- GAUAGUGACUCCCCAAGUGAUG -22
Get sequence
|
|---|
| Mature sequence |
Bge-Mir-3-P28a-v1_3p |
| mirBase accession | None |
|---|
| Sequence |
38- UCACUGGGAAGACAUUAUCGU -59
Get sequence
|
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